Detail Information of hs0000913
[Genome Browser]
1.Basic Information
Name:
hs0000913
Species:
Homo sapiens
Cell Line:
HEK293
Restriction Enzyme:
BamHI
2.Experiment Infromation
Remark:
CTCF-dependent interactions
Primer amount:
NA
Test repetition:
three
Reliability Level:
II
3.Locus Information
| Anchor | |||
|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand |
KSHV,site 129020-129040,CTCF |
:129020-129040 | KSHV-129020-129040-F :CAGCCCGATGGCCCTTCAGGC | + |
| Target | |||
| Locus2 | Fragment location | Primer sequence | Strand |
|
KSHV,site 72888,5' primer segment |
:72568-72588 | KSHV-72568-72588-F:TTAGGGTAAGAAGCTTCGGCG | NA |
4.Reference
Kang, H., et al. (2011). "Coordination of KSHV latent and lytic gene control by CTCF-cohesin mediated chromosome conformation." PLoS Pathog 7(8): e1002140. PMID: 21876668
| ©BIG 2015, Beijing Institute of Genomics, Chinese Academy of Sciences
NO.1 Beichen West Road, Chaoyang District, Beijing 100101, China.
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