Detail Information of hs0000558
[Genome Browser]
1.Basic Information
Name:
hs0000558
Species:
Homo sapiens
Cell Line:
HB2
Restriction Enzyme:
BamHI
2.Experiment Infromation
Remark:
Depletion of cohesin by siRNA results in ablation of the CTCF-mediated loops
Primer amount:
NA
Test repetition:
NA
Reliability Level:
III
3.Locus Information
| Anchor | |||
|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand |
H19,downstream enhancer,segment m |
11:2008020-2008974 | CCTTCCTGCTGCTCAGAGGTT | + |
| Target | |||
| Locus2 | Fragment location | Primer sequence | Strand |
|
H19,CCD,segment h |
11:2046498-2058354 | AACAAAATTTCAGCCGGTTCA | + |
4.Reference
Nativio, R., et al. (2009). "Cohesin is required for higher-order chromatin conformation at the imprinted IGF2-H19 locus." PLoS Genet 5(11): e1000739. PMID: 19956766
| ©BIG 2015, Beijing Institute of Genomics, Chinese Academy of Sciences
NO.1 Beichen West Road, Chaoyang District, Beijing 100101, China.
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