Detail Information of hs0000554 [Genome Browser]
1.Basic Information

Name: hs0000554
Species: Homo sapiens
Cell Line: HB2
Restriction Enzyme: BamHI

2.Experiment Infromation

Remark: Depletion of cohesin by siRNA results in ablation of the CTCF-mediated loops
Primer amount: NA
Test repetition: NA
Reliability Level: III

3.Locus Information

Anchor
Locus1 Fragment location Primer sequence Strand
H19,ICR,segment k 11:2020471-2020622 TGAATTTGCCCACAGGTGTTC -
Target
Locus2 Fragment location Primer sequence Strand
IGF2,CTCF AD/DMR0,segment a 11:2170278-2184339 CAGGCAGTTTCGGCAGAGA -

4.Reference

Nativio, R., et al. (2009). "Cohesin is required for higher-order chromatin conformation at the imprinted IGF2-H19 locus." PLoS Genet 5(11): e1000739.   PMID: 19956766

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