Browse Data
The Locus List of
Cell Line K562
Name | Anchor | Target | |||||||
---|---|---|---|---|---|---|---|---|---|
Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
21 | hs0000204 | β-globin,CTCF,segment C-20 | chr11:5497302-5497321 | NA | NA | β-globin,CTCF,segment C-24 | chr11:5575094-5575120 | NA | NA |
22 | hs0000205 | β-globin,CTCF,segment C-21 | chr11:5528055-5528074 | NA | NA | β-globin,CTCF,segment C-26 | chr11:5621959-5621978 | NA | NA |
23 | hs0000206 | β-globin,CTCF,segment C-24 | chr11:5575094-5575120 | NA | NA | β-globin,CTCF,segment C-26 | chr11:5621959-5621978 | NA | NA |
24 | hs0000242 | HBB,LCR HS5 | chr11:5406794-5409512 | CCAATGATATGGTGGCTAAAAAAGTCAATCCC | + | HBG1-HBG2,segment primer 12/19 | chr11:5527977-5531519 | CCATTCAGACCCACATTCAGCTACTTCCTG | + |
25 | hs0000243 | HBB,LCR HS5 | chr11:5406794-5409512 | CCAATGATATGGTGGCTAAAAAAGTCAATCCC | + | HBB,3'HS1,segmnt primer18/19 | chr11:5568532-5574478 | CCTAACATCTCACCTTTAGTAACTAGCAGAGCC | + |
26 | hs0000245 | HBB,LCR HS5 | chr11:5406794-5409512 | CCAATGATATGGTGGCTAAAAAAGTCAATCCC | + | HBG,segment primer 8/19 | chr11:5508826-5511270 | GTGTCTGTGACTTACTAAGGAGAAAGTCAATTCC | + |
27 | hs0000291 | HBB,LCR HS2 to HS4 | chr11:5301795-5308306 | CCTGCAGCAAGAATGATTGC | + | HBG2,segment 6 | chr11:5275341-5279075 | GGCTGAGACCCAGTGGC | - |
28 | hs0000292 | HBB,LCR HS2 to HS4 | chr11:5301795-5308306 | CCTGCAGCAAGAATGATTGC | + | HBG1,segment 7 | chr11:5270401-5275330 | AAGAAACTGCAGAGGACTAACTGG | - |
29 | hs0000362 | HBB,LCR HS2 | NA | NA | NA | HBB,3'HS1 | NA | NA | NA |
30 | hs0000363 | HBG | NA | NA | NA | HBB,3'HS1 | NA | NA | NA |
31 | hs0000364 | HBB,LCR HS5 | NA | NA | NA | HBG2 | NA | NA | NA |
32 | hs0000365 | HBB,LCR HS5 | NA | NA | NA | HBB,3'HS1 | NA | NA | NA |
33 | hs0000370 | HBB,segment C8,CTCF | chr11:4656878-4663080 | TATGCTGTGGCCAGTGTGAT | - | HBB,segment C10,CTCF | chr11:4749763-4753487 | TAGAAGGGAGGCCTGACTGG | - |
34 | hs0000422 | ALOXE3 | chr17:8022124-8028056 | GGCTCGGGCGAGTCATAGTGAGATACGC | + | PER1 | chr17:8039996-8042921 | CTCTTAGTGGGTGACAGTAAGTGAAAATCAGC | + |
35 | hs0000423 | ALOXE3 | chr17:8022124-8028056 | GGCTCGGGCGAGTCATAGTGAGATACGC | + | TMEM | chr17:8090179-8090727 | TCCCGGTGCATCTGCCACACGCTGTTGG | + |
36 | hs0000424 | ALOXE3 | chr17:8022124-8028056 | GGCTCGGGCGAGTCATAGTGAGATACGC | + | AUR1 | chr17:8124576-8125815 | CCGTAGGTGTATTTCAGGCACCAATCGTCAG | + |
37 | hs0000425 | ALOXE3 | chr17:8022124-8028056 | GGCTCGGGCGAGTCATAGTGAGATACGC | + | AUR1 | chr17:8129435-8130882 | CACCTTCTTTGTGCTTGTGAACACCTCTAGG | + |
38 | hs0000470 | HBB,LCR HS2 | chr11:5300249-5302174 | GTTTGCTTAGAAGGTTACAGAACCAGAAGG | + | HBB,promoter | chr11:5325666-5329118 | CATGGTTCAGAGAAAAATCCATAACAACATCAAG | + |
39 | hs0000641 | MYC,segment CTD-2034C18 | chr8:128745463-128751378 | GGCTGGATACCTTTCCCATT | + | MYC,enhancer,segment E1-E2 | chr8:130554921-130560905 | TCCTGAGATGAGGCTGAGGT | + |
40 | hs0000642 | MYC,segment CTD-2034C18 | chr8:128745463-128751378 | GGCTGGATACCTTTCCCATT | + | MYC,enhancer,segment E3-E4 | chr8:130599947-130605226 | TGATCAGAATTGCTCCTTCG | + |