Browse Data
The Locus List of
Cell Line K562
Name | Anchor | Target | |||||||
---|---|---|---|---|---|---|---|---|---|
Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
1 | hs0000022 | TAL1,+53kb segment, CTCF | chr1:47644097-47645470 | CGGAGGAAGTGCTGAACC | + | TAL1,-31kb segment,CTCF | chr1:47727978-47729018 | GGCTGTTGAGGAGTAGTAGTGTAA | - |
2 | hs0000104 | HBB,segment C14,CTCF | chr11:5147505-5150214 | AAGATGGTTGTAGGCATGCAG | - | HBB,segment C15,CTCF | chr11:5227594-5228850 | AACCCCCTGGAGAAAAATTG | - |
3 | hs0000105 | HBB,segment C15,CTCF | chr11:5227594-5228850 | AACCCCCTGGAGAAAAATTG | - | HBB,segment C16,CTCF | chr11:5314016-5327066 | TTTGCTTCCACATCAATCCA | - |
4 | hs0000106 | HBB,segment C16,CTCF | chr11:5314016-5327066 | TTTGCTTCCACATCAATCCA | - | HBB,segment C17,CTCF | chr11:5406794-5409512 | ATTGGCAAAAACTGCCATTA | - |
5 | hs0000107 | HBB,segment C16,CTCF | chr11:5314016-5327066 | TTTGCTTCCACATCAATCCA | - | HBB,segment C20,CTCF | chr11:5495198-5497230 | GACCACACTGGAGGCTTGAT | + |
6 | hs0000108 | HBB,segment C18,CTCF | chr11:5409507-5410499 | GTGAGGGCGAGGTTATCAAA | + | HBB,segment C24,CTCF | chr11:5575217-5575652 | TCTTTGTGCTTTTTGATAGAG | - |
7 | hs0000109 | HBB,segment C20,CTCF | chr11:5495198-5497230 | GACCACACTGGAGGCTTGAT | + | HBB,segment C21,CTCF | chr11:5518323-5527982 | AGGCAGGGCAGTGAGTAAAA | + |
8 | hs0000110 | HBB,segment C20,CTCF | chr11:5495198-5497230 | GACCACACTGGAGGCTTGAT | + | HBB,segment C24,CTCF | chr11:5575217-5575652 | TCTTTGTGCTTTTTGATAGAG | - |
9 | hs0000111 | HBB,segment C21,CTCF | chr11:5518323-5527982 | AGGCAGGGCAGTGAGTAAAA | + | HBB,segment C26,CTCF | chr11:5622001-5631270 | AAGCTCTGGCCCTGGTTC | - |
10 | hs0000112 | HBB,segment C24,CTCF | chr11:5575217-5575652 | TCTTTGTGCTTTTTGATAGAG | - | HBB,segment C26,CTCF | chr11:5622001-5631270 | AAGCTCTGGCCCTGGTTC | - |
11 | hs0000138 | HBB,LCR HS5 | NA | NA | NA | HBB,3'HS1 | NA | NA | NA |
12 | hs0000139 | HBB,LCR HS2 to HS3 | NA | NA | NA | HBG2 | NA | NA | NA |
13 | hs0000140 | HBB,LCR HS5 | NA | NA | NA | HBG2 | NA | NA | NA |
14 | hs0000197 | β-globin,CTCF,segment C-08 | chr11:4656841-4656861 | NA | NA | β-globin,CTCF,segment C-10 | chr11:4749681-4749700 | NA | NA |
15 | hs0000198 | β-globin,CTCF,segment C-14 | chr11:5147398-5147418 | NA | NA | β-globin,CTCF,segment C-15 | chr11:5227561-5227586 | NA | NA |
16 | hs0000199 | β-globin,CTCF,segment C-16 | chr11:5313962-5313982 | NA | NA | β-globin,CTCF,segment C-15 | chr11:5227561-5227586 | NA | NA |
17 | hs0000200 | β-globin,CTCF,segment C-16 | chr11:5313962-5313982 | NA | NA | β-globin,CTCF,segment C-18 | chr11:5410531-5410551 | NA | NA |
18 | hs0000201 | β-globin,CTCF,segment C-16 | chr11:5313962-5313982 | NA | NA | β-globin,CTCF,segment C-20 | chr11:5497302-5497321 | NA | NA |
19 | hs0000202 | β-globin,CTCF,segment C-18 | chr11:5410531-5410551 | NA | NA | β-globin,CTCF,segment C-24 | chr11:5575094-5575120 | NA | NA |
20 | hs0000203 | β-globin,CTCF,segment C-20 | chr11:5497302-5497321 | NA | NA | β-globin,CTCF,segment C-21 | chr11:5528055-5528074 | NA | NA |