Browse Data
The Locus List of
Cell Line HEK293T
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 21 |
hs0000215 |
β-globin,CTCF,segment C-20 |
chr11:5497302-5497321 | NA | NA |
β-globin,CTCF,segment C-24 |
chr11:5575094-5575120 | NA | NA |
| 22 |
hs0000216 |
β-globin,CTCF,segment C-21 |
chr11:5528055-5528074 | NA | NA |
β-globin,CTCF,segment C-24 |
chr11:5575094-5575120 | NA | NA |
| 23 | hs0000293 |
LMP1,promoter,CTCF |
NA | NA | NA |
OriP |
NA | NA | NA |
| 24 | hs0000294 |
LMP1,promoter,CTCF |
NA | NA | NA |
Cp/Wp |
NA | NA | NA |
| 25 |
hs0000920 |
KSHV,site 129211,CTCF |
chr:129180-129200 | TAGGACAGAAAGGTCACCTGG | + |
KSHV,site 69163,upstream of ORF50 segment |
chr:69143-69163 | KSHV_69143-69163-R:AAGTGGTGATCTTAGGCCAGG | - |
| 26 |
hs0000921 |
KSHV,site 129211,CTCF |
chr:129180-129200 | TAGGACAGAAAGGTCACCTGG | + |
KSHV,site 111415F,CTCF |
chr:111415-111435 | KSHV_111415-111435-F: CCTTGAACGCTCGAATCACGC | + |
| 27 |
hs0000922 |
KSHV,site 129211,CTCF |
chr:129180-129200 | TAGGACAGAAAGGTCACCTGG | + |
KSHV,site 130130F,CTCF |
chr:130130-130150 | KSHV 130130-130150-F:TGTTGCTGTGGTGCTGCTGTT | NA |
| 28 |
hs0000923 |
KSHV,site 129211,CTCF |
chr:129180-129200 | TAGGACAGAAAGGTCACCTGG | + |
KSHV,133,164R,CTCF |
chr:133144-133164 | KSHV 133144-133164-R:GACCGGCCTGGAGCTGTTTGT | NA |
| 29 | hs0000924 |
KSHV,site 129211,CTCF |
chr:129180-129200 | TAGGACAGAAAGGTCACCTGG | + |
KSHV,site 111,480,3' end of the latency transcript segment |
NA | NA | NA |
| 30 |
hs0000925 |
KSHV,site 129211,CTCF |
chr:129180-129200 | TAGGACAGAAAGGTCACCTGG | + |
KSHV,site 69036,CTCF |
chr:69036-69056 | KSHV 69036-69056-F: GACGGAAGCCTCTAGCTCTCT | NA |
| 31 |
hs0000926 |
KSHV,site 129211,CTCF |
chr:129180-129200 | TAGGACAGAAAGGTCACCTGG | + |
KSHV,site 72818,CTCF |
chr:72818-72838 | KSHV_72818-72838-F: TCTCGAATGAGGACCAAAGGC | NA |