Browse Data
The Locus List of
Cell Line erythroid cells
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 1 |
hs0000131 |
HBB,LCR HS2 |
chr11:5300249-5302174 | GAACTGCTCATGCTTGGAC | + |
HBB,LCR HS3 |
chr11:5305481-5307392 | GCCTGCATTTATTGTTGTG | + |
| 2 |
mm0000050 |
Lmo2,distal regulatory element,segment 75 |
chr2:103891421-103897021 | CCCTACAACATGCATCTCCA | - |
Lmo2,enhancer |
chr2:103969249-103972076 | AGGAGAGAAACAACAACCCTTT | + |
| 3 |
mm0000051 |
Lmo2,distal regulatory element,segment 75 |
chr2:103891421-103897021 | CCCTACAACATGCATCTCCA | - |
Lmo2,upstream of proximal promoter,segment 1 |
chr2:103967272-103969254 | GGGGACCTAGGTTTTTCTCCT | + |
| 4 |
mm0000052 |
Lmo2,distal regulatory element,segment 75 |
chr2:103891421-103897021 | CCCTACAACATGCATCTCCA | - |
Lmo2,upstream of proximal promoter,segment 2 |
chr2:103965328-103967277 | TTCAGACTTCTGACATCCTTATTTC | + |
| 5 |
mm0000053 |
Lmo2,distal regulatory element,segment 75 |
chr2:103891421-103897021 | CCCTACAACATGCATCTCCA | - |
Lmo2,distal regulatory element,segment 90 |
chr2:103880813-103889266 | TTGGGGTCATTATCTCTTTGCT | - |
| 6 |
mm0000054 |
Lmo2,distal regulatory element,segment 75 |
chr2:103891421-103897021 | CCCTACAACATGCATCTCCA | - |
Lmo2,distal regulatory element,upstream of segment 90 |
chr2:103865291-103875281 | GGCCCTTATAATTTGGCACA | + |
| 7 |
mm0000055 |
Lmo2,distal regulatory element,segment 75 |
chr2:103891421-103897021 | CCCTACAACATGCATCTCCA | - |
Lmo2,distal regulatory element,segment 35 |
chr2:103935766-103937497 | CTGGGCCAAGGGGTATAGAG | - |
| 8 |
mm0000056 |
Lmo2, proximal promoter |
chr2:103969249-103972076 | AGGAGAGAAACAACAACCCTTT | + |
Lmo2,distal regulatory element,segment 35 |
chr2:103935766-103937497 | CTGGGCCAAGGGGTATAGAG | - |
| 9 |
mm0000057 |
Lmo2, proximal promoter |
chr2:103969249-103972076 | AGGAGAGAAACAACAACCCTTT | + |
Lmo2,distal regulatory element,segment 12 |
chr2:103951738-103965333 | CTGCCTTACCTTGAGCTTGG | + |
| 10 |
mm0000058 |
Lmo2, proximal promoter |
chr2:103969249-103972076 | AGGAGAGAAACAACAACCCTTT | + |
Lmo2,distal regulatory element,segment 25 |
chr2:103939161-103951505 | ACCCTTGGCAATTAACGTGT | + |
| 11 |
mm0000059 |
Lmo2, proximal promoter |
chr2:103969249-103972076 | AGGAGAGAAACAACAACCCTTT | + |
Lmo2,distal regulatory element,segment 70 |
chr2:103897016-103904308 | GGACTACGGAGCTGAAACCA | + |
| 12 |
mm0000060 |
Lmo2, proximal promoter |
chr2:103969249-103972076 | AGGAGAGAAACAACAACCCTTT | + |
Lmo2,distal regulatory element,segment 75 |
chr2:103889261-103891426 | TGCTTGATCATGGTTACAGGTC | - |
| 13 |
mm0000061 |
Lmo2, proximal promoter |
chr2:103969249-103972076 | AGGAGAGAAACAACAACCCTTT | + |
Lmo2,distal regulatory element,segment 90 |
chr2:103880813-103889266 | TTGGGGTCATTATCTCTTTGCT | - |
| 14 |
mm0000187 |
Hbb-b1promoter |
chr7:103827237-103828268 | AATCGCTGCTCCCCCTCACT | - |
HS4/5 of the LCR |
chr7:103868029-103874906 | TTCAAGTTCTCATCCTTCACTG | + |
| 15 |
mm0000188 |
Hbb-b1promoter |
chr7:103827237-103828268 | AATCGCTGCTCCCCCTCACT | - |
HS-62/-60 |
chr7:103910574-103913162 | GGGTGTGGGTATTTGTAAGAG | + |
| 16 |
mm0000189 |
Hbb-b1promoter |
chr7:103827237-103828268 | AATCGCTGCTCCCCCTCACT | - |
-42 fragment |
chr7:103890787-103892124 | ATGAACAAGTTTCATGGGG | - |
| 17 |
mm0000190 |
Hbb-b1promoter |
chr7:103827939-103828626 | CTGATTCCGTAGAGCCACACC | - |
HS4/5 of the LCR |
chr7:103873587-103874767 | TACTAATAAAAGCAAGCCATCTCG | + |
| 18 |
mm0000191 |
Hbb-b1promoter |
chr7:103827939-103828626 | CTGATTCCGTAGAGCCACACC | - |
HS-62/-60 |
chr7:103913129-103913536 | TGTAGTTCTCTAGTGTAGCCACCAG | - |
| 19 |
mm0000192 |
Hbb-b1promoter |
chr7:103827939-103828626 | CTGATTCCGTAGAGCCACACC | - |
-42 fragment |
chr7:103891364-103892385 | TAGATGCATGGTCTTAATGGTCC | + |
| 20 |
mm0000193 |
Ercc3 (anchor) |
chr18:32243691-32247629 | CAGACAGTTTGCAGAGATGGC | + |
Ercc3 (test) |
chr18:32234489-32242080 | CCCTTCTTGATAGTGATGTGACAGT | + |