Browse Data
The Locus List of
Cell Line THP-1
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 1 |
hs0000050 |
TNFAIP3,TT>A enhancer |
chr6:138229431-138234409 | GTTCAGGGGTATGCCCGAAGCTAA | - |
TNFAIP3,promoter,segment 8 |
chr6:138183353-138205585 | TGAGTCACCTGGGCATTTCGGAA | - |
| 2 |
hs0000051 |
TNFAIP3,TT>A enhancer |
chr6:138229431-138234409 | GTTCAGGGGTATGCCCGAAGCTAA | - |
TNFAIP3,intron2,segmetnt 16 |
chr6:138183353-138205585 | GGTGAGCTGGAATAGGGCTACTCA | - |
| 3 |
hs0000052 |
TNFAIP3,TT>A enhancer |
chr6:138229431-138234409 | GTTCAGGGGTATGCCCGAAGCTAA | - |
TNFAIP3,3'UTR,segment 24 |
chr6:138183353-138205585 | GCAGCTGAGGGGTTCAGAGGA | - |
| 4 |
hs0000053 |
TNFAIP3,TT>A enhancer |
chr6:138229431-138234409 | GTTCAGGGGTATGCCCGAAGCTAA | - |
TNFAIP3,segment7 |
chr6:138183353-138205585 | TCAGTTCACCCCAGGGTGCTGAT | - |
| 5 |
hs0000054 |
TNFAIP3,TT>A enhancer |
chr6:138229431-138234409 | GTTCAGGGGTATGCCCGAAGCTAA | - |
TNFAIP3,segment 9 |
chr6:138183353-138205585 | AACCAACGCCAGGTAGACGGT | - |
| 6 |
hs0000055 |
TNFAIP3,TT>A enhancer |
chr6:138229431-138234409 | GTTCAGGGGTATGCCCGAAGCTAA | - |
TNFAIP3,segment 10 |
chr6:138183353-138205585 | CAGCGCTTCTGCAAGGTCTACGT | - |
| 7 |
hs0000476 |
FCGRT,promoter |
chr19:49996007-50015134 | GAACTCGGATAGAGGTGACAGTTGCAC | + |
FCGRT,NF-kB |
chr19:50017399-50020895 | GAGGTGTTGTCAGGGCCCAGTTCACAG | - |
| 8 |
hs0000477 |
FCGRT,promoter |
chr19:49996007-50015134 | GAACTCGGATAGAGGTGACAGTTGCAC | + |
FCGRT,NF-kB |
chr19:50022882-50031605 | GTCCACAGAACAGCACAGAAGCAAGC | - |
| 9 |
hs0000494 |
DEXI,promoter |
chr16:11036502-11036868 | GGTTTGAACTGTGTTCAGTCTCTTT | - |
CLEC16A,intron 19 |
chr16:11198767-11198786 | GCTTCCGAAGACCAGGATAC | + |
| 10 |
hs0000495 |
CLEC16A,intron 19 |
chr16:11198767-11198786 | GCTTCCGAAGACCAGGATAC | + |
DEXI,promoter |
chr16:11036502-11036868 | GGTTTGAACTGTGTTCAGTCTCTTT | - |
| 11 |
hs0000507 |
IL-10,promoter,vitamin D response elements |
chr1:206773799-206774159 | GCCCAGCCAGCGTGAAGT | + |
IL-10,TSS |
chr1:206945750-206946114 | CGGGAAACCTTGATTGTGG | - |
| 12 |
hs0000569 |
CD68,promoter |
chr17:7482499-7482886 | GCACCCATGTGACACTGTTG | + |
CD68,3′UTR,segment primer 8 |
chr17:7485605-7487154 | GAATGGCTCTACCGGCTTGC | - |
| 13 |
hs0000570 |
CD68,promoter |
chr17:7482499-7482886 | GCACCCATGTGACACTGTTG | + |
CD68,3′UTR,segment primer 2 |
chr17:7482899-7484019 | GCTCTTGGTAGTCCTGTGG | - |
| 14 |
hs0000571 |
CD68,promoter |
chr17:7482499-7482886 | GCACCCATGTGACACTGTTG | + |
CD68,3′UTR,segment primer 3 |
chr17:7484032-7484213 | GTGCTGCGTGGGGGAAGGAC | - |
| 15 |
hs0000572 |
CD68,promoter |
chr17:7482499-7482886 | GCACCCATGTGACACTGTTG | + |
CD68,3′UTR,segment primer 6 |
chr17:7484342-7485026 | CTGGCAGAGTCTTGTAGAGG | - |
| 16 |
hs0000573 |
CD68,promoter |
chr17:7482499-7482886 | GCACCCATGTGACACTGTTG | + |
CD68,3′UTR,segment primer 7 |
chr17:7484342-7485026 | GTACCCTTATTTCCTCGACACG | + |
| 17 |
hs0000694 |
APOC2,+1378kb segment |
chr19:45444956-45450670 | GCCCTAAGGTAACACATTTGATC | + |
APOC2,-2712kb segment |
chr19:45427522-45429205 | GACAACCTCTGCTCCTCTCCACCG | - |
| 18 |
hs0000813 |
DEXI,promoter |
chr16:11036502-11036868 | GGTTTGAACTGTGTTCAGTCTCTTT | - |
CLEC16A,intron 19 |
chr16:11198767-11198786 | GCTTCCGAAGACCAGGATAC | + |
| 19 |
hs0000814 |
CLEC16A,intron 19 |
chr16:11198767-11198786 | GCTTCCGAAGACCAGGATAC | + |
DEXI,promoter |
chr16:11036502-11036868 | GGTTTGAACTGTGTTCAGTCTCTTT | - |