Browse Data
The Locus List of
Cell Line T cells
Name | Anchor | Target | |||||||
---|---|---|---|---|---|---|---|---|---|
Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
1 | hs0000059 | FBXO10,promoter,MCS5A1 | chr9:37582306-37584789 | CAGTCTCAACCTCTCCACCTGTAA | + | TOMM5,+2.4kb segment,MCS5A2 | chr9:37593157-37594654 | CAACCCTTGGTGAGTGTTTAGAA | + |
2 | hs0000060 | FBXO10,promoter,MCS5A1 | chr9:37582306-37584789 | CAGTCTCAACCTCTCCACCTGTAA | + | FRMPD1,+14.5kb segment | chr9:37604336-37607822 | TTACAGGGTCGGGGATTTATAGT | + |
3 | hs0000061 | TOMM5,+2.4kb segment,MCS5A2 | chr9:37593157-37594654 | CAACCCTTGGTGAGTGTTTAGAA | + | TOMM5,+2.4kb segment,MCS5A2 | chr9:37593157-37594654 | CAACCCTTGGTGAGTGTTTAGAA | + |
4 | hs0000062 | MCS5A2 | chr9:37589849-37593162 | GGGGCTGTGCACATAGGTA | + | FRMPD1,+14.5kb segment | chr9:37604336-37607822 | TTACAGGGTCGGGGATTTATAGT | + |
5 | mm0000362 | Cd8a promoter,segment A | NA | NA | NA | Cd8b locus cluster IV,segment B | NA | NA | NA |
6 | mm0000435 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | Tcrd,segment 1 | chr14:54132932-54143032 | TCGACCCTGCTATAGTCATC | + |
7 | mm0000436 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | Tcrd,segment 2 | chr14:54146090-54149109 | CTCAGAGGGACTCAACAGAAG | + |
8 | mm0000437 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | TEA,promoter,segment 3 | chr14:54149104-54149797 | GTCCCTCTGTGTAAGGATGG | + |
9 | mm0000438 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | TEA,promoter,segment 4 | chr14:54149946-54153642 | CCATGATGTTTCCCTAGTGC | + |
10 | mm0000439 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | TEA,promoter,segment 5 | chr14:54153637-54158008 | GGAGACCCAGTCACAGAAAG | + |
11 | mm0000440 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | Tcra,segment 6 | chr14:54159208-54159565 | CCAGGCACTTGGAAATGTTG | + |
12 | mm0000441 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | Tcra,segment 7 | chr14:54161204-54164230 | CTTTGTCCACCCTCCTAATG | + |
13 | mm0000442 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | Tcra,segment 8 | chr14:54173575-54176604 | GGTCTATGGGCAGTTTGATG | + |
14 | mm0000443 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | Tcra,segment 9 | chr14:54176599-54185876 | CCCAGTGTTTAAGAGCAGATG | + |
15 | mm0000444 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | Tcra,segment 10 | chr14:54187689-54189423 | GACAGTGTCCTCAGAGTTGG | + |
16 | mm0000445 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | Tcra,segment 11 | chr14:54196098-54203255 | AGGGGACCATATTAAAGGTG | + |
17 | mm0000446 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | Tcra,enhancer,segment 12 | chr14:54210384-54211678 | AACTCCTTCACCTGGATCAC | + |
18 | mm0000447 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | Tcra,enhancer,segment 16 | chr14:54235212-54241930 | CCCATGCCACTCTCAGTTAG | + |
19 | mm0000448 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | TRAV19 | chr14:53844121-53845311 | TGCAGTTCCCTGAGTAGAAG | + |
20 | mm0000449 | Tcra,enhancer,segment Eα | chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + | Trav21-dv12 | chr14:53870397-53877053 | ATCTCTGAGGGTCCAAAGC | + |