Browse Data
The Locus List of
Cell Line MCF7
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 1 | hs0000002 |
MYC,breast cancer risk locus |
NA | NA | NA |
MYC |
NA | NA | NA |
| 2 |
hs0000063 |
RET,segment B |
chr10:43522179-43522784 | AACCCCGTGTGTCCTTCAG | + |
RET,segment I |
chr10:43576124-43579027 | ACCGTCACTTTCCCTGTGTT | + |
| 3 |
hs0000064 |
RET,segment B |
chr10:43522179-43522784 | AACCCCGTGTGTCCTTCAG | + |
RET,segment J |
chr10:43605070-43606784 | CTAGGGGTGGTCACCTCAGC | + |
| 4 |
hs0000065 |
RET,segment I |
chr10:43576124-43579027 | ACCGTCACTTTCCCTGTGTT | + |
RET,segment J |
chr10:43620141-43624299 | GGCCCTGATGACCTGTCCTTATTC | + |
| 5 | hs0000072 |
TFF1,promoter |
NA | NA | NA |
TFF1,distal enhancer |
NA | NA | NA |
| 6 |
hs0000091 |
PGR,proximal region |
chr11:100996191-101001685 | TGGAAGTTAGGCAGATAG | + |
PGR,distal 48 |
chr11:101047557-101062534 | TAATAATGGTTAGTGGACAG | + |
| 7 |
hs0000092 |
PGR,proximal region |
chr11:100996191-101001685 | GTGGAAGTTAGGCAGATAGAG | + |
PGR,distal 168 |
chr11:101163031-101165153 | CTTGTGGAATAGTGTCAATACG | + |
| 8 |
hs0000093 |
PGR,proximal region |
chr11:100996191-101001685 | GGAAGTTAGGCAGATAGAG | + |
PGR,distal 205 |
chr11:101200408-101208329 | AAGTGACTGGTAACAAGAG | + |
| 9 |
hs0000094 |
PGR,proximal region |
chr11:100996191-101001685 | ATTTGGAGTTGGTTGTTC | - |
PGR,distal 211 |
chr11:101208926-101218494 | GTGTGATGTTAGATTCCG | + |
| 10 |
hs0000095 |
PGR,proximal region |
chr11:100996191-101001685 | GAAGTTAGGCAGATAGAG | + |
PGR,distal 221 |
chr11:101222306-101226358 | TTGCTTAATACTTATTGAGG | + |
| 11 |
hs0000096 |
PGR,proximal region |
chr11:100996191-101001685 | GGAAGTTAGGCAGATAGAGG | + |
PGR,distal 306 |
chr11:101304045-101308115 | AGTGCTTATGCTCCAAGG | + |
| 12 |
hs0000097 |
PGR,proximal region |
chr11:100996191-101001685 | AGTTGGTTGTTCTAGTAAATA | + |
PGR,distal 311 |
chr11:101308110-101313783 | GCATTTCCTCTACAGACTC | + |
| 13 |
hs0000287 |
GREB1,ERBS2 |
chr2:11634875-11641486 | TAGGCTTCAAGAGGACCACA | + |
GREB1,segment c |
chr2:11634875-11641486 | Outer:ACTCCATTCTTACTCCAGTT/Inner:GAGAATGTTTGACACTGCTA | + |
| 14 |
hs0000288 |
P2RY2,ERBS1 |
chr11:72900568-72911730 | CCATCAAAGCTGTTGCTTCT | + |
P2RY2,segment a |
chr11:72935984-72942281 | Outer:GCAGGAGGATTTCAAGTA/Inner:AGCAACAAGAGGTAGAGC | + |
| 15 |
hs0000289 |
P2RY2,ERBS1 |
chr11:72900568-72911730 | CCATCAAAGCTGTTGCTTCT | + |
P2RY2,segment c |
chr11:72935984-72942281 | Outer:GCAGGAGGATTTCAAGTA/Inner:AGCAACAAGAGGTAGAGC | + |
| 16 |
hs0000319 |
FGFR2,promoter |
chr10:123354202-123361026 | TCATTCTCTAAGCTACATCTCAATAGTGCCCTCGG | + |
FGFR2,segment 3 |
chr10:123342324-123343165 | GGCAGCAGTCAGGGTTAGCCTCTTTCC | + |
| 17 | hs0000322 |
LY64,segment 1 |
NA | NA | NA |
LY64,segment 2 |
NA | NA | NA |
| 18 |
hs0000323 |
TFF,segment 2 |
chr21:43735348-43738661 | CCTGTGTGAGTACTGCCCTGACT | - |
TFF,segment 10 |
chr21:43808790-43809326 | GGGGAGACCACATAAGCAATAAGAT | - |
| 19 |
hs0000324 |
TFF,segment 10 |
chr21:43808790-43809326 | GGGGAGACCACATAAGCAATAAGAT | - |
TFF,segment 2 |
chr21:43735348-43738661 | CCTGTGTGAGTACTGCCCTGACT | - |
| 20 |
hs0000325 |
TFF,segment 1 |
chr21:43729507-43731387 | TTCAAAAGGGAACAGATAGCTCAGA | + |
TFF,segment 2 |
chr21:43735348-43738661 | CCTGTGTGAGTACTGCCCTGACT | - |