Browse Data
The Locus List of
Cell Line LNCaP
Name | Anchor | Target | |||||||
---|---|---|---|---|---|---|---|---|---|
Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
1 | hs0000003 | MYC,prostate cancer region 2 | NA | NA | NA | MYC | NA | NA | NA |
2 | hs0000004 | MYC,prostate cancer region 3 | NA | NA | NA | MYC | NA | NA | NA |
3 | hs0000005 | MYC,prostate cancer region 1 | NA | NA | NA | MYC | NA | NA | NA |
4 | hs0000103 | KLK3,promoter | chr19:51357846-51361877 | GCCCTATAAAACCTTCATTCCCC | - | KLK3,enhancer | chr19:51351733-51354188 | ATGTTCACATTAGTACACCTTGCC | + |
5 | hs0000285 | KLK3,enhancer | chr19:51351733-51354188 | TCGATTGTCCTTGACAGTAAACA | + | KLK2,promoter,segment D | chr19:51373972-51375333 | ACCCTTGACCTCCTGGACTT | + |
6 | hs0000286 | KLK3,enhancer | chr19:51351733-51354188 | TCGATTGTCCTTGACAGTAAACA | + | KLK2,promoter,segment E | chr19:51375328-51378157 | TGCCCATTGCCTAAAGAAGT | + |
7 | hs0000445 | SOX9,enhancer,segment E1 | chr17:69105438-69109150 | GCCCAGCATCCTATACGTGA | + | SOX9,promoter | chr17:70121329-70122408 | AGGCAGGAGGAAATGCACTA | - |
8 | hs0000461 | PMEPA1 | chr20:56278415-56285978 | CCCACCTCCAGCCTCTTAAAA | + | PMEPA1,enhencer 1 | chr20:56338713-56345363 | GCACGTATTTGTAAGGTGCTGG | + |
9 | hs0000621 | SDC1,AI-OR | chr2:20294514-20298337 | CAGGTCAGCACTTGGTACGTT | + | SDC1 | chr2:20422548-20439549 | GAAGTTGGGTCCTCCACCTAT | - |
10 | hs0000622 | DGAT2,AI-OR | chr11:75272261-75274383 | GAGGAAAATGAGGGGGCTTTG | + | SERPINH1,promoter | chr11:75272261-75274383 | GAGGAAAATGAGGGGGCTTTG | + |
11 | hs0000623 | SYS1,promoter,AI-OR | chr20:43987659-43988426 | GGCCAATGAAGCTAAACAAAGG | + | SLPI,promoter | chr20:43882236-43888879 | CCCTCAAAAGTGGTGCTTTGT | - |
12 | hs0000651 | MYC,enhancer,segment E | chr8:128406277-128416808 | AATTTCCCATCCACATTCCACAAGCAACTGT | + | MYC,promoter | chr8:128745463-128751378 | GGCCAAACCAAATACCCATCACCTTCTGC | + |
13 | hs0000693 | ABCC4,promoter | chr13:95952033-95957007 | GAGTGGCGGGTGTGTGTG | - | ABCC4,enhancer,GATA2 | chr13:95923610-95926048 | GTGACCTTCTTATCCTCTGCTTCC | - |