Browse Data
The Locus List of
Cell Line K562
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 1 |
hs0000022 |
TAL1,+53kb segment, CTCF |
chr1:47644097-47645470 | CGGAGGAAGTGCTGAACC | + |
TAL1,-31kb segment,CTCF |
chr1:47727978-47729018 | GGCTGTTGAGGAGTAGTAGTGTAA | - |
| 2 |
hs0000104 |
HBB,segment C14,CTCF |
chr11:5147505-5150214 | AAGATGGTTGTAGGCATGCAG | - |
HBB,segment C15,CTCF |
chr11:5227594-5228850 | AACCCCCTGGAGAAAAATTG | - |
| 3 |
hs0000105 |
HBB,segment C15,CTCF |
chr11:5227594-5228850 | AACCCCCTGGAGAAAAATTG | - |
HBB,segment C16,CTCF |
chr11:5314016-5327066 | TTTGCTTCCACATCAATCCA | - |
| 4 |
hs0000106 |
HBB,segment C16,CTCF |
chr11:5314016-5327066 | TTTGCTTCCACATCAATCCA | - |
HBB,segment C17,CTCF |
chr11:5406794-5409512 | ATTGGCAAAAACTGCCATTA | - |
| 5 |
hs0000107 |
HBB,segment C16,CTCF |
chr11:5314016-5327066 | TTTGCTTCCACATCAATCCA | - |
HBB,segment C20,CTCF |
chr11:5495198-5497230 | GACCACACTGGAGGCTTGAT | + |
| 6 |
hs0000108 |
HBB,segment C18,CTCF |
chr11:5409507-5410499 | GTGAGGGCGAGGTTATCAAA | + |
HBB,segment C24,CTCF |
chr11:5575217-5575652 | TCTTTGTGCTTTTTGATAGAG | - |
| 7 |
hs0000109 |
HBB,segment C20,CTCF |
chr11:5495198-5497230 | GACCACACTGGAGGCTTGAT | + |
HBB,segment C21,CTCF |
chr11:5518323-5527982 | AGGCAGGGCAGTGAGTAAAA | + |
| 8 |
hs0000110 |
HBB,segment C20,CTCF |
chr11:5495198-5497230 | GACCACACTGGAGGCTTGAT | + |
HBB,segment C24,CTCF |
chr11:5575217-5575652 | TCTTTGTGCTTTTTGATAGAG | - |
| 9 |
hs0000111 |
HBB,segment C21,CTCF |
chr11:5518323-5527982 | AGGCAGGGCAGTGAGTAAAA | + |
HBB,segment C26,CTCF |
chr11:5622001-5631270 | AAGCTCTGGCCCTGGTTC | - |
| 10 |
hs0000112 |
HBB,segment C24,CTCF |
chr11:5575217-5575652 | TCTTTGTGCTTTTTGATAGAG | - |
HBB,segment C26,CTCF |
chr11:5622001-5631270 | AAGCTCTGGCCCTGGTTC | - |
| 11 | hs0000138 |
HBB,LCR HS5 |
NA | NA | NA |
HBB,3'HS1 |
NA | NA | NA |
| 12 | hs0000139 |
HBB,LCR HS2 to HS3 |
NA | NA | NA |
HBG2 |
NA | NA | NA |
| 13 | hs0000140 |
HBB,LCR HS5 |
NA | NA | NA |
HBG2 |
NA | NA | NA |
| 14 |
hs0000197 |
β-globin,CTCF,segment C-08 |
chr11:4656841-4656861 | NA | NA |
β-globin,CTCF,segment C-10 |
chr11:4749681-4749700 | NA | NA |
| 15 |
hs0000198 |
β-globin,CTCF,segment C-14 |
chr11:5147398-5147418 | NA | NA |
β-globin,CTCF,segment C-15 |
chr11:5227561-5227586 | NA | NA |
| 16 |
hs0000199 |
β-globin,CTCF,segment C-16 |
chr11:5313962-5313982 | NA | NA |
β-globin,CTCF,segment C-15 |
chr11:5227561-5227586 | NA | NA |
| 17 |
hs0000200 |
β-globin,CTCF,segment C-16 |
chr11:5313962-5313982 | NA | NA |
β-globin,CTCF,segment C-18 |
chr11:5410531-5410551 | NA | NA |
| 18 |
hs0000201 |
β-globin,CTCF,segment C-16 |
chr11:5313962-5313982 | NA | NA |
β-globin,CTCF,segment C-20 |
chr11:5497302-5497321 | NA | NA |
| 19 |
hs0000202 |
β-globin,CTCF,segment C-18 |
chr11:5410531-5410551 | NA | NA |
β-globin,CTCF,segment C-24 |
chr11:5575094-5575120 | NA | NA |
| 20 |
hs0000203 |
β-globin,CTCF,segment C-20 |
chr11:5497302-5497321 | NA | NA |
β-globin,CTCF,segment C-21 |
chr11:5528055-5528074 | NA | NA |