Browse Data
The Locus List of
Cell Line A549
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 1 |
hs0000029 |
TAL1,ncRNA,segment a3 |
chr1:47641771-47661022 | CAACTTCTAGATCAGCGCCTTC | - |
TAL1,segment 4 |
chr1:47702165-47708881 | ATCTTTTCCGTGTAGCTCTTCCT | + |
| 2 |
hs0000030 |
SNAI1,ncRNA,segment a7 |
chr20:48653626-48661831 | CTAGGTCAGGCCCAAAGAGA | - |
SNAI1,segment s4 |
chr20:48587014-48597692 | ATTGGCAAGAAGGGGAAAAT | - |
| 3 |
hs0000031 |
SNAI1,ncRNA,segment a7 |
chr20:48653626-48661831 | CTAGGTCAGGCCCAAAGAGA | - |
Aurka,segment E |
chr20:54960992-54970163 | CAGACCTGATTCTCACCCTCTTG | - |
| 4 |
hs0000490 |
DEXI,promoter |
chr16:11036502-11036868 | GGTTTGAACTGTGTTCAGTCTCTTT | - |
CLEC16A,intron 19 |
chr16:11198767-11198786 | GCTTCCGAAGACCAGGATAC | + |
| 5 |
hs0000491 |
CLEC16A,intron 19 |
chr16:11198767-11198786 | GCTTCCGAAGACCAGGATAC | + |
DEXI,promoter |
chr16:11036502-11036868 | GGTTTGAACTGTGTTCAGTCTCTTT | - |
| 6 |
hs0000626 |
PTGS2,promoter,segment C1 |
chr1:186649906-186650632 | TCAGATTCCTGGAGAGGAAG | - |
PLA2G4A,promoter,segment T4 |
chr1:186797342-186798124 | CCCAAATTCCATGAGAATCAATTC | - |
| 7 |
hs0000627 |
PTGS2,promoter,segment C1 |
chr1:186649906-186650632 | TCAGATTCCTGGAGAGGAAG | - |
PLA2G4A,promoter,segment T5 |
chr1:186797342-186798124 | CCTACTCAGGATAAGACTTTCTC | + |
| 8 |
hs0000628 |
PTGS2,promoter,segment C2 |
chr1:186649906-186650632 | TCCCTGATGCGTGGATTATTT | + |
PLA2G4A,promoter,segment T5 |
chr1:186797342-186798124 | CCTACTCAGGATAAGACTTTCTC | + |
| 9 |
hs0000629 |
PTGS2,promoter,segment C2 |
chr1:186649906-186650632 | TCCCTGATGCGTGGATTATTT | + |
PLA2G4A,promoter,segment T1 |
chr1:186788627-186789079 | ACAGTGCCTACTATATGAAACAAAC | - |
| 10 |
hs0000630 |
PTGS2,promoter,segment C2 |
chr1:186649906-186650632 | TCCCTGATGCGTGGATTATTT | + |
PLA2G4A,promoter,segment T2 |
chr1:186791785-186793735 | GTATTGCTTCCGTTGTTTAGGTC | + |
| 11 |
hs0000631 |
PTGS2,promoter,segment C2 |
chr1:186649906-186650632 | TCCCTGATGCGTGGATTATTT | + |
PLA2G4A,promoter,segment T3 |
chr1:186797038-186797345 | GTAAGAGAGTTAGGAGAGTGAGTTC | + |
| 12 |
hs0000632 |
PTGS2,promoter,segment C2 |
chr1:186649906-186650632 | TCCCTGATGCGTGGATTATTT | + |
PLA2G4A,promoter,segment T4 |
chr1:186797342-186798124 | CCCAAATTCCATGAGAATCAATTC | - |
| 13 |
hs0000633 |
PTGS2,promoter,segment C2 |
chr1:186649906-186650632 | TCCCTGATGCGTGGATTATTT | + |
PLA2G4A,promoter,segment T5 |
chr1:186797342-186798124 | CCTACTCAGGATAAGACTTTCTC | + |
| 14 |
hs0000634 |
PTGS2,promoter,segment C2 |
chr1:186649906-186650632 | TCCCTGATGCGTGGATTATTT | + |
PLA2G4A,promoter,segment T6 |
chr1:186798121-186798388 | TGAGAATCTTCAGGCTCCTC | - |
| 15 |
hs0000635 |
PTGS2,promoter,segment C2 |
chr1:186649906-186650632 | TCCCTGATGCGTGGATTATTT | + |
PLA2G4A,promoter,segment T7 |
chr1:186802438-186804414 | GTAAACTGGGATGTTCACCC | + |
| 16 |
hs0000636 |
PTGS2,promoter,segment C2 |
chr1:186649906-186650632 | TCCCTGATGCGTGGATTATTT | + |
PLA2G4A,promoter,segment T8 |
chr1:186808004-186809540 | GAAAGATTTATGTCAGGGTGAAGAA | - |
| 17 |
hs0000788 |
MUC2,promoter |
chr11:1064547-1067231 | ACTCGATTATGCACAGATG | - |
MUC5AC |
chr11:72308931-72322821 | CCTTCCACTCACCTTCAC | - |
| 18 |
hs0000789 |
MUC2,promoter |
chr11:1064547-1067231 | ACTCGATTATGCACAGATG | - |
MUC5B |
chr11:1242250-1247558 | TCTCCCTTTGTTCTTTGTG | - |
| 19 | hs0000792 |
TERT,promoter |
NA | CTCCCTGCTGCGCAGCCAC | NA |
TERT,enhancer |
chr5:1301284-1301713 | CGTCTAACAACAGTAACTTCCACTGTTC | + |
| 20 |
hs0000815 |
DEXI,promoter |
chr16:11036502-11036868 | GGTTTGAACTGTGTTCAGTCTCTTT | - |
CLEC16A,intron 19 |
chr16:11198767-11198786 | GCTTCCGAAGACCAGGATAC | + |