Browse Data
The Locus List of
Cell Line HEK293
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 1 |
hs0000056 |
TNFAIP3,TT>A enhancer |
chr6:138229431-138234409 | GTTCAGGGGTATGCCCGAAGCTAA | - |
TNFAIP3,promoter,segment 8 |
chr6:138183353-138205585 | TGAGTCACCTGGGCATTTCGGAA | - |
| 2 |
hs0000057 |
TNFAIP3,TT>A enhancer |
chr6:138229431-138234409 | GTTCAGGGGTATGCCCGAAGCTAA | - |
TNFAIP3,intron2,segmetnt 16 |
chr6:138183353-138205585 | GGTGAGCTGGAATAGGGCTACTCA | - |
| 3 |
hs0000058 |
TNFAIP3,TT>A enhancer |
chr6:138229431-138234409 | GTTCAGGGGTATGCCCGAAGCTAA | - |
TNFAIP3,3'UTR,segment 24 |
chr6:138183353-138205585 | GCAGCTGAGGGGTTCAGAGGA | - |
| 4 |
hs0000438 |
LMO2,promoter |
chr11:33913203-33917307 | GAGCCAGAAGAAGTGGTGATTA | - |
CAT,promoter |
chr11:34459688-34467291 | TTAAACACTGGAGAAATCTGCTT | - |
| 5 |
hs0000444 |
HMOX1,enhancer,+220bp segment |
chr22:35777515-35780142 | GCTAGTGAGGGACAGATGCCACCAAG | - |
HMOX1,promoter,-4.5kb segment |
chr22:35771433-35774214 | GAAAGCAAGCCCAGACCGGCAGC | + |
| 6 |
hs0000504 |
WNK4, promoter |
chr17:40913921-40933662 | GAGGTGGAAAATAGGATGGGAAGT | + |
WNK4, enhancer |
chr17:40948634-40949316 | GGCGTTCTTGTTTCCAGCATT | - |
| 7 |
hs0000536 |
MYC,promoter |
chr8:128745990-128756984 | AGCAGCAGATACCGCCCCTCCT | - |
MYC,enhancer,segment C |
chr8:128235179-128236036 | CCATTTGAGGGTGGAAGAGC | - |
| 8 |
hs0000537 |
MYC,promoter |
chr8:128745990-128756984 | AGCAGCAGATACCGCCCCTCCT | - |
MYC,enhancer,segment D |
chr8:128256948-128263221 | GCACAGACGAGGAGCAGTC | - |
| 9 |
hs0000538 |
MYC,promoter |
chr8:128745990-128756984 | AGCAGCAGATACCGCCCCTCCT | - |
MYC,enhancer,segment B |
chr8:128233030-128235184 | TTCCCAGTCTTTTCATCTGCT | - |
| 10 |
hs0000539 |
MYC,promoter |
chr8:128745990-128756984 | AGCAGCAGATACCGCCCCTCCT | - |
MYC,enhancer,segment E |
chr8:128226854-128233035 | TCAGAGGAAAAACACAGACACC | - |
| 11 |
hs0000688 |
KCNK9,promoter |
chr8:140702972-140722121 | CGCTGCTTTCTGGCCCCAAGC | + |
TRAPPC9,enhancer |
chr8:141163544-141170921 | GCCATATGTAATATACTATACGCAGGTG | - |
| 12 |
hs0000689 |
KCNK9,promoter |
chr8:140702972-140722121 | CGCTGCTTTCTGGCCCCAAGC | + |
PEG13,DMR |
chr8:141127897-141129032 | GACAATGTGCATTTGATGTTGTATC | - |
| 13 |
hs0000690 |
KCNK9,promoter |
chr8:140702972-140722121 | CGCTGCTTTCTGGCCCCAAGC | + |
PEG13,DMR |
chr8:141103139-141116732 | CACAGGGAAAGGTCCTTATCC | - |
| 14 |
hs0000691 |
KCNK9,promoter |
chr8:141163544-141170921 | GCCATATGTAATATACTATACGCAGGTG | - |
KCNK9,promoter |
chr8:140718568-140722121 | CTTGAGTGGCCACCTACCAG | + |
| 15 |
hs0000692 |
KCNK9,promoter |
chr8:141163544-141170921 | GCCATATGTAATATACTATACGCAGGTG | - |
PEG1, promoter |
chr8:141116727-141122213 | GACTTGCAGTCTGTTTCTCTTGC | - |
| 16 | hs0000724 |
HMHO1,promoter,cAMP-response element |
NA | GCCTCCTGGGTTCAAGCGATT | NA |
HO-1HMHO1,promoter,E-box element |
chr22:35774663-35777550 | CCAGTTCCTGGAATAGTGCCTGG | - |
| 17 |
hs0000804 |
DPP10,segment primer2(name differ loci) |
chr16:21511275-21518865 | TCTTTGTCGGAATCCACTCGGTACACACAC | + |
DPP10,segment primer7 |
chr16:22447033-22450608 | CAAGTGCTTTATTTCTTGGCTCTGGGGAGG | + |
| 18 |
hs0000912 |
KSHV,site 129020-129040,CTCF |
chr:129020-129040 | KSHV-129020-129040-F :CAGCCCGATGGCCCTTCAGGC | + |
KSHV,site 69094,3' primer segment |
chr:66088-66108 | KSHV-66088-66108-R: CATTCTATGGGAGTCATGTGT | NA |
| 19 |
hs0000913 |
KSHV,site 129020-129040,CTCF |
chr:129020-129040 | KSHV-129020-129040-F :CAGCCCGATGGCCCTTCAGGC | + |
KSHV,site 72888,5' primer segment |
chr:72568-72588 | KSHV-72568-72588-F:TTAGGGTAAGAAGCTTCGGCG | NA |
| 20 |
hs0000914 |
KSHV,site 129020-129040,CTCF |
chr:129020-129040 | KSHV-129020-129040-F :CAGCCCGATGGCCCTTCAGGC | + |
KSHV,site 107,008,3' primer segment,CTCF |
chr:104499-104520 | KSHV-104499-104520-R:ATGACGTGTGCAGGACTGTTGG | NA |