Browse Data
The Locus List of
Cell Line DKO
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 1 |
mm0000392 |
Opn1lw,Opn1mv.enhancer,LCR |
chrX:74123419-74123719 | GGGAAAGAGGAGGTGGAATAAG | + |
Opn1mw,promoter |
chrX:74124680-74128033 | CCCCTCTCTCTACCCATCAAATAC | - |
| 2 |
mm0000393 |
Opn1lw,Opn1mv.enhancer,LCR |
chrX:74123419-74123719 | GGGAAAGAGGAGGTGGAATAAG | + |
Opn1mw,segment E2 |
chrX:74132708-74133765 | CCACAAGAATCATCCAGGTGC | - |
| 3 |
mm0000394 |
Opn1lw,Opn1mv.enhancer,LCR |
chrX:74123419-74123719 | GGGAAAGAGGAGGTGGAATAAG | + |
Opn1mw,segment E3/E4 |
chrX:74136744-74140476 | CCATAGTTGCTTGTGCTCTGGAG | - |
| 4 |
mm0000395 |
Opn1lw,Opn1mv.enhancer,LCR |
chrX:74123419-74123719 | GGGAAAGAGGAGGTGGAATAAG | + |
Opn1mw,segment E5 |
chrX:74143234-74144733 | AATGACCTGATTTGGGGGC | - |
| 5 |
mm0000396 |
Opn1lw,Opn1mv.enhancer,LCR |
chrX:74123419-74123719 | GGGAAAGAGGAGGTGGAATAAG | + |
Opn1mw,segment E6 |
chrX:74149948-74150829 | CGACATTTTGTTGCCTGATTC | - |
| 6 |
mm0000397 |
Opn1sw,upstream promoter |
chr6:29381857-29383803 | AAACCCAAGCAGGAAGTTGC | - |
Opn1sw,promoter |
chr6:29380311-29380704 | GGTCAGTATTGGTTTCTGTGGC | + |
| 7 |
mm0000398 |
Opn1sw,upstream promoter |
chr6:29381857-29383803 | AAACCCAAGCAGGAAGTTGC | - |
Opn1sw,segment E1 |
chr6:29380092-29380316 | GGGCTGTCGCAACTTTTTG | + |
| 8 |
mm0000399 |
Opn1sw,upstream promoter |
chr6:29381857-29383803 | AAACCCAAGCAGGAAGTTGC | - |
Opn1sw,segment E2 |
chr6:29379722-29379937 | AGGAAAGCCAATGACCATCC | + |
| 9 |
mm0000400 |
Opn1sw,upstream promoter |
chr6:29381857-29383803 | AAACCCAAGCAGGAAGTTGC | - |
Opn1sw,segment E3/E4 |
chr6:29378207-29379557 | GGGATGAACCTGAAAAGGACC | + |
| 10 |
mm0000401 |
Opn1sw,upstream promoter |
chr6:29381857-29383803 | AAACCCAAGCAGGAAGTTGC | - |
Opn1sw,segment E5 |
chr6:29377732-29378046 | ACCACTCCCCATCTTTCCC | + |
| 11 |
mm0000411 |
Gnat2,promoter |
chr14:33950458-33952392 | TCCTGGTAGTCTTCACCCTCTCC | + |
Gnat2,segment E2 |
chr3:108094759-108096038 | AGAGGTTGAGCCAGGGTTTC | - |
| 12 |
mm0000412 |
Gnat2,promoter |
chr14:33950458-33952392 | TCCTGGTAGTCTTCACCCTCTCC | + |
Gnat2,segment E4 |
chr3:108096033-108098904 | CAACCTGTCTCAATGACGGTG | - |
| 13 |
mm0000413 |
Gnat2,promoter |
chr14:33950458-33952392 | TCCTGGTAGTCTTCACCCTCTCC | + |
Gnat2,segment E7 |
chr3:108099242-108099651 | TTACTCACTCTAATGCTCCTGCTG | - |
| 14 |
mm0000424 |
IgH,iEμ |
chr12:113411093-113422107 | GCACATGTGGAGGACACGTTCTT | + |
IgK,iEκ |
chr6:70715840-70728068 | CACCTAAAGAAATATCTAATACCCAGTGCA | + |
| 15 |
mm0000425 |
IgH,3'RR |
chr12:113241043-113241396 | TCAGCTGTCACAAACACAGGCTCA | - |
IgK,iEκ |
chr6:70715840-70728068 | CACCTAAAGAAATATCTAATACCCAGTGCA | + |
| 16 |
mm0000652 |
Rbp3,enhancer |
chr14:33950458-33952392 | TCCTGGTAGTCTTCACCCTCTCC | + |
Rbp3,segment E1 |
chr14:33954892-33955110 | TGTGAGGAAGAAGTTGGACTGG | - |
| 17 |
mm0000653 |
Rbp3,enhancer |
chr14:33950458-33952392 | TCCTGGTAGTCTTCACCCTCTCC | + |
Rbp3,segment E2 |
chr14:33958258-33959084 | CTAAGGAAATGGGAAGGAGTGAG | - |
| 18 |
mm0000654 |
Rbp3,enhancer |
chr14:33950458-33952392 | TCCTGGTAGTCTTCACCCTCTCC | + |
Rbp3,segment E3 |
chr14:33959079-33961334 | AGAGAATGGCTGTCCTGGGAG | - |
| 19 |
mm0000655 |
Rbp3,enhancer |
chr14:33950458-33952392 | TCCTGGTAGTCTTCACCCTCTCC | + |
Rbp3,segment E4 |
chr14:33962392-33962702 | CCACTTGTCACTTCACCGATG | - |