Browse Data
The Locus List of
Cell Line Caco-2
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 1 |
hs0000066 |
CFTR,promoter |
chr7:117119404-117119423 | GCAGTGTGGGTCTGATGCAT | - |
CFTR,DHS10 |
chr7:117213146-117213170 | ACCCTATATCATTGCCCTTTGTATG | + |
| 2 |
hs0000067 |
CFTR,promoter |
chr7:117119404-117119423 | GCAGTGTGGGTCTGATGCAT | - |
CFTR,DHS11 |
chr7:117228530-117228555 | TGACTCTGATGTCAAATGTTTCTCAA | + |
| 3 |
hs0000068 |
CFTR,promoter |
chr7:117119404-117119423 | GCAGTGTGGGTCTGATGCAT | - |
CFTR,3' insulators,segment III |
chr7:117326509-117326532 | CTGTGGTTTGAATGTGTTCCCTAA | _ |
| 4 |
hs0000069 |
CFTR,insulator,-20.9kb segment |
chr7:117100195-117100220 | CCAAATACTGGACAAAAATGAACTTC | + |
CFTR,DHS10 |
chr7:117213146-117213170 | ACCCTATATCATTGCCCTTTGTATG | + |
| 5 |
hs0000070 |
CFTR,insulator,-20.9kb segment |
chr7:117100195-117100220 | CCAAATACTGGACAAAAATGAACTTC | + |
CFTR,DHS11 |
chr7:117228530-117228555 | TGACTCTGATGTCAAATGTTTCTCAA | + |
| 6 | hs0000528 |
CFTR,promoter |
chr7:117119359-117120898 | GCAGTGTGGGTCTGATGCAT | - |
CFTR,-20.9 kb DHS |
NA | NA | NA |
| 7 | hs0000529 |
CFTR,promoter |
chr7:117119359-117120898 | GCAGTGTGGGTCTGATGCAT | - |
CFTR,+15.6 kb DHS |
NA | NA | NA |
| 8 | hs0000574 |
CFTR,promoter |
NA | NA | NA |
CFTR,intron 1,DHS |
NA | NA | NA |
| 9 |
hs0000575 |
CFTR,promoter |
chr7:117119359-117120898 | GCAGTGTGGGTCTGATGCAT | - |
CFTR,intron 11,DHS |
chr7:117224214-117233278 | TGACTCTGATGTCAAATGTTTCTCAA | + |
| 10 |
hs0000576 |
CFTR,promoter |
chr7:117119359-117120898 | GCAGTGTGGGTCTGATGCAT | - |
CFTR,+6.8 kb DHS |
chr7:117310322-117332213 | CTGTGGTTTGAATGTGTTCCCTAA | + |
| 11 |
hs0000577 |
CFTR,promoter |
chr7:117119359-117120898 | GCAGTGTGGGTCTGATGCAT | - |
CFTR,intron 10,DHS |
chr7:117212906-117213193 | ACCCTATATCATTGCCCTTTGTATG | + |