Browse Data
The Locus List of
Cell Line C57BL/6
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 1 |
mm0000011 |
Rho,enhancer |
chr6:115929081-115930605 | ATGGAAGGAAGGGGGTTGC | - |
Rho,promoter |
chr6:115931612-115931911 | TGCGACTGGAACCTTTGG | - |
| 2 |
mm0000012 |
Rho,enhancer |
chr6:115929081-115930605 | ATGGAAGGAAGGGGGTTGC | - |
Rho.exon 1 |
chr6:115931906-115933563 | TTCGTAGACAGAGACCAAGGC | - |
| 3 |
mm0000013 |
Rho,enhancer |
chr6:115929081-115930605 | ATGGAAGGAAGGGGGTTGC | - |
Rho,coding region,segment E2 |
chr6:115933628-115934394 | CAGTTAGTAGCCGTCAGTCCTCC | - |
| 4 |
mm0000014 |
Rho,enhancer |
chr6:115929081-115930605 | ATGGAAGGAAGGGGGTTGC | - |
Rho,coding region,segment E3/E4 |
chr6:115934887-115935919 | CAGGAAGAGAACACACGCC | - |
| 5 |
mm0000015 |
Rho,enhancer |
chr6:115929081-115930605 | ATGGAAGGAAGGGGGTTGC | - |
Rho,coding region,segment E5 |
chr6:115935914-115936548 | TTGGGGAGAGGGGGACACAC | - |
| 6 |
mm0000016 |
Opn1mv,enhancer,LCR |
chrX:74123419-74123719 | GGGAAAGAGGAGGTGGAATAAG | + |
Opn1mw,promoter |
chrX:74124680-74128033 | CCCCTCTCTCTACCCATCAAATAC | - |
| 7 |
mm0000017 |
Opn1mv,enhancer,LCR |
chrX:74123419-74123719 | GGGAAAGAGGAGGTGGAATAAG | + |
Opn1mw,segment E2 |
chrX:74132708-74133765 | CCACAAGAATCATCCAGGTGC | - |
| 8 |
mm0000018 |
Opn1mv,enhancer,LCR |
chrX:74123419-74123719 | GGGAAAGAGGAGGTGGAATAAG | + |
Opn1mw,segment E3/E4 |
chrX:74136744-74140476 | CCATAGTTGCTTGTGCTCTGGAG | - |
| 9 |
mm0000019 |
Opn1mv,enhancer,LCR |
chrX:74123419-74123719 | GGGAAAGAGGAGGTGGAATAAG | + |
Opn1mw,segment E5 |
chrX:74143234-74144733 | AATGACCTGATTTGGGGGC | - |
| 10 |
mm0000020 |
Opn1mv,enhancer,LCR |
chrX:74123419-74123719 | GGGAAAGAGGAGGTGGAATAAG | + |
Opn1mw,segment E6 |
chrX:74149948-74150829 | CGACATTTTGTTGCCTGATTC | - |
| 11 |
mm0000021 |
Opn1sw,upstream promoter |
chr6:29381857-29383803 | AAACCCAAGCAGGAAGTTGC | - |
Opn1sw,promoter |
chr6:29380311-29380704 | GGTCAGTATTGGTTTCTGTGGC | + |
| 12 |
mm0000022 |
Opn1sw,upstream promoter |
chr6:29381857-29383803 | AAACCCAAGCAGGAAGTTGC | - |
Opn1sw,segment E1 |
chr6:29380092-29380316 | GGGCTGTCGCAACTTTTTG | + |
| 13 |
mm0000023 |
Opn1sw,upstream promoter |
chr6:29381857-29383803 | AAACCCAAGCAGGAAGTTGC | - |
Opn1sw,segment E2 |
chr6:29379722-29379937 | AGGAAAGCCAATGACCATCC | + |
| 14 |
mm0000024 |
Opn1sw,upstream promoter |
chr6:29381857-29383803 | AAACCCAAGCAGGAAGTTGC | - |
Opn1sw,segment E3/E4 |
chr6:29378207-29379557 | GGGATGAACCTGAAAAGGACC | + |
| 15 |
mm0000025 |
Opn1sw,upstream promoter |
chr6:29381857-29383803 | AAACCCAAGCAGGAAGTTGC | - |
Opn1sw,segment E5 |
chr6:29377732-29378046 | ACCACTCCCCATCTTTCCC | + |
| 16 |
mm0000026 |
Rbp3,enhancer |
chr14:33950458-33952392 | TCCTGGTAGTCTTCACCCTCTCC | + |
Rbp3,segment E1 |
chr14:33954892-33955110 | TGTGAGGAAGAAGTTGGACTGG | - |
| 17 |
mm0000027 |
Rbp3,enhancer |
chr14:33950458-33952392 | TCCTGGTAGTCTTCACCCTCTCC | + |
Rbp3,segment E2 |
chr14:33958258-33959084 | CTAAGGAAATGGGAAGGAGTGAG | - |
| 18 |
mm0000028 |
Rbp3,enhancer |
chr14:33950458-33952392 | TCCTGGTAGTCTTCACCCTCTCC | + |
Rbp3,segment E3 |
chr14:33959079-33961334 | AGAGAATGGCTGTCCTGGGAG | - |
| 19 |
mm0000029 |
Rbp3,enhancer |
chr14:33950458-33952392 | TCCTGGTAGTCTTCACCCTCTCC | + |
Rbp3,segment E4 |
chr14:33962392-33962702 | CCACTTGTCACTTCACCGATG | - |
| 20 |
mm0000030 |
Gnat1,segment Pg1 |
chr9:107679511-107679814 | TGTGGAGAGCCAGTTGATTG | - |
Gnat1,segment E2 |
chr9:107677485-107679074 | GTCTGAGGGCAAAATGTGC | + |