Browse Data
The Locus List of
Cell Line T cells
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 1 |
hs0000059 |
FBXO10,promoter,MCS5A1 |
chr9:37582306-37584789 | CAGTCTCAACCTCTCCACCTGTAA | + |
TOMM5,+2.4kb segment,MCS5A2 |
chr9:37593157-37594654 | CAACCCTTGGTGAGTGTTTAGAA | + |
| 2 |
hs0000060 |
FBXO10,promoter,MCS5A1 |
chr9:37582306-37584789 | CAGTCTCAACCTCTCCACCTGTAA | + |
FRMPD1,+14.5kb segment |
chr9:37604336-37607822 | TTACAGGGTCGGGGATTTATAGT | + |
| 3 |
hs0000061 |
TOMM5,+2.4kb segment,MCS5A2 |
chr9:37593157-37594654 | CAACCCTTGGTGAGTGTTTAGAA | + |
TOMM5,+2.4kb segment,MCS5A2 |
chr9:37593157-37594654 | CAACCCTTGGTGAGTGTTTAGAA | + |
| 4 |
hs0000062 |
MCS5A2 |
chr9:37589849-37593162 | GGGGCTGTGCACATAGGTA | + |
FRMPD1,+14.5kb segment |
chr9:37604336-37607822 | TTACAGGGTCGGGGATTTATAGT | + |
| 5 | mm0000362 |
Cd8a promoter,segment A |
NA | NA | NA |
Cd8b locus cluster IV,segment B |
NA | NA | NA |
| 6 |
mm0000435 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
Tcrd,segment 1 |
chr14:54132932-54143032 | TCGACCCTGCTATAGTCATC | + |
| 7 |
mm0000436 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
Tcrd,segment 2 |
chr14:54146090-54149109 | CTCAGAGGGACTCAACAGAAG | + |
| 8 |
mm0000437 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
TEA,promoter,segment 3 |
chr14:54149104-54149797 | GTCCCTCTGTGTAAGGATGG | + |
| 9 |
mm0000438 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
TEA,promoter,segment 4 |
chr14:54149946-54153642 | CCATGATGTTTCCCTAGTGC | + |
| 10 |
mm0000439 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
TEA,promoter,segment 5 |
chr14:54153637-54158008 | GGAGACCCAGTCACAGAAAG | + |
| 11 |
mm0000440 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
Tcra,segment 6 |
chr14:54159208-54159565 | CCAGGCACTTGGAAATGTTG | + |
| 12 |
mm0000441 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
Tcra,segment 7 |
chr14:54161204-54164230 | CTTTGTCCACCCTCCTAATG | + |
| 13 |
mm0000442 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
Tcra,segment 8 |
chr14:54173575-54176604 | GGTCTATGGGCAGTTTGATG | + |
| 14 |
mm0000443 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
Tcra,segment 9 |
chr14:54176599-54185876 | CCCAGTGTTTAAGAGCAGATG | + |
| 15 |
mm0000444 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
Tcra,segment 10 |
chr14:54187689-54189423 | GACAGTGTCCTCAGAGTTGG | + |
| 16 |
mm0000445 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
Tcra,segment 11 |
chr14:54196098-54203255 | AGGGGACCATATTAAAGGTG | + |
| 17 |
mm0000446 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
Tcra,enhancer,segment 12 |
chr14:54210384-54211678 | AACTCCTTCACCTGGATCAC | + |
| 18 |
mm0000447 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
Tcra,enhancer,segment 16 |
chr14:54235212-54241930 | CCCATGCCACTCTCAGTTAG | + |
| 19 |
mm0000448 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
TRAV19 |
chr14:53844121-53845311 | TGCAGTTCCCTGAGTAGAAG | + |
| 20 |
mm0000449 |
Tcra,enhancer,segment Eα |
chr14:54222279-54228944 | AAGTCAAGGCACAGACAGTC | + |
Trav21-dv12 |
chr14:53870397-53877053 | ATCTCTGAGGGTCCAAAGC | + |