Browse Data
The Locus List of
Cell Line LNCaP
| Name | Anchor | Target | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Locus1 | Fragment location | Primer sequence | Strand | Locus2 | Fragment location | Primer sequence | Strand | ||
| 1 | hs0000003 |
MYC,prostate cancer region 2 |
NA | NA | NA |
MYC |
NA | NA | NA |
| 2 | hs0000004 |
MYC,prostate cancer region 3 |
NA | NA | NA |
MYC |
NA | NA | NA |
| 3 | hs0000005 |
MYC,prostate cancer region 1 |
NA | NA | NA |
MYC |
NA | NA | NA |
| 4 |
hs0000103 |
KLK3,promoter |
chr19:51357846-51361877 | GCCCTATAAAACCTTCATTCCCC | - |
KLK3,enhancer |
chr19:51351733-51354188 | ATGTTCACATTAGTACACCTTGCC | + |
| 5 |
hs0000285 |
KLK3,enhancer |
chr19:51351733-51354188 | TCGATTGTCCTTGACAGTAAACA | + |
KLK2,promoter,segment D |
chr19:51373972-51375333 | ACCCTTGACCTCCTGGACTT | + |
| 6 |
hs0000286 |
KLK3,enhancer |
chr19:51351733-51354188 | TCGATTGTCCTTGACAGTAAACA | + |
KLK2,promoter,segment E |
chr19:51375328-51378157 | TGCCCATTGCCTAAAGAAGT | + |
| 7 |
hs0000445 |
SOX9,enhancer,segment E1 |
chr17:69105438-69109150 | GCCCAGCATCCTATACGTGA | + |
SOX9,promoter |
chr17:70121329-70122408 | AGGCAGGAGGAAATGCACTA | - |
| 8 |
hs0000461 |
PMEPA1 |
chr20:56278415-56285978 | CCCACCTCCAGCCTCTTAAAA | + |
PMEPA1,enhencer 1 |
chr20:56338713-56345363 | GCACGTATTTGTAAGGTGCTGG | + |
| 9 |
hs0000621 |
SDC1,AI-OR |
chr2:20294514-20298337 | CAGGTCAGCACTTGGTACGTT | + |
SDC1 |
chr2:20422548-20439549 | GAAGTTGGGTCCTCCACCTAT | - |
| 10 |
hs0000622 |
DGAT2,AI-OR |
chr11:75272261-75274383 | GAGGAAAATGAGGGGGCTTTG | + |
SERPINH1,promoter |
chr11:75272261-75274383 | GAGGAAAATGAGGGGGCTTTG | + |
| 11 |
hs0000623 |
SYS1,promoter,AI-OR |
chr20:43987659-43988426 | GGCCAATGAAGCTAAACAAAGG | + |
SLPI,promoter |
chr20:43882236-43888879 | CCCTCAAAAGTGGTGCTTTGT | - |
| 12 |
hs0000651 |
MYC,enhancer,segment E |
chr8:128406277-128416808 | AATTTCCCATCCACATTCCACAAGCAACTGT | + |
MYC,promoter |
chr8:128745463-128751378 | GGCCAAACCAAATACCCATCACCTTCTGC | + |
| 13 |
hs0000693 |
ABCC4,promoter |
chr13:95952033-95957007 | GAGTGGCGGGTGTGTGTG | - |
ABCC4,enhancer,GATA2 |
chr13:95923610-95926048 | GTGACCTTCTTATCCTCTGCTTCC | - |